Datasets:
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Browse files- current_release/ParentChildTreeFile.txt +0 -0
- current_release/entry.list +0 -0
- current_release/interpro.xml.gz +3 -0
- current_release/interpro.xml.gz.md5 +1 -0
- current_release/interpro2go +0 -0
- current_release/match_complete.xml.gz +3 -0
- current_release/match_complete.xml.gz.md5 +1 -0
- current_release/names.dat +0 -0
- current_release/protein2ipr.dat.gz +3 -0
- current_release/protein2ipr.dat.gz.md5 +1 -0
- current_release/release_notes.txt +89 -0
- current_release/short_names.dat +0 -0
- current_release/sites.xml.gz +3 -0
current_release/ParentChildTreeFile.txt
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current_release/entry.list
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current_release/interpro.xml.gz
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current_release/interpro.xml.gz.md5
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59bb9a11620aa9ee64b6cf8ca51693ea interpro.xml.gz
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current_release/interpro2go
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current_release/match_complete.xml.gz
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oid sha256:3af9566b987b92c2c35b8330a7fbc666d29411bfe67b8ca6f7282762d445a9ed
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current_release/match_complete.xml.gz.md5
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385a8ca1fdc0d31751704aceedcdd855 match_complete.xml.gz
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current_release/names.dat
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current_release/protein2ipr.dat.gz
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oid sha256:f4bc8fe0a11eda55a56b420b67fdf1d727d3eb966474f54a1bd0c59226ef4ff5
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current_release/protein2ipr.dat.gz.md5
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d722648460460c6259bfd3a05ad00fef protein2ipr.dat.gz
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current_release/release_notes.txt
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Release Notes
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======================================
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Release 108.0, 29th January 2026
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New features include:
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* The addition of 1911 InterPro entries.
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* An update to NCBIFAM (18.0), Pfam (38.1).
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* Integration of 2891 new methods from the CATH-Gene3D (3), CDD (47), HAMAP (1), NCBIFAM (927), PANTHER (29), Pfam (1878), SMART (2), SUPERFAMILY (4) databases.
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Contents and coverage of InterPro 108.0
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InterPro protein matches are now calculated for all UniProtKB and UniParc
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proteins. The following statistics are for all UniProtKB proteins.
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InterPro release 108.0 contains 51489 entries, representing:
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Active site 133
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Binding site 82
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Conserved site 768
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Domain 19276
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Family 27308
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Homologous superfamily 3510
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Ptm 17
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Repeat 395
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Last Entry IPR061508
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InterPro cites 63250 publications in PubMed.
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Member database information
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Signature Database Version Signatures* Integrated Signatures**
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CATH-Gene3D 4.3.0 6631 2820
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CDD 3.21 19902 5040
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HAMAP 2025_01 2391 2386
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NCBIFAM 18.0 33732 7069
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PANTHER 19.0 15683 10491
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PIRSF 3.10 3285 3223
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PRINTS 42.0 2106 1938
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PROSITE patterns 2025_01 1311 1282
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PROSITE profiles 2025_01 1399 1303
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Pfam 38.1 27481 26620
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SFLD 4 303 160
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SMART 9.0 1322 1276
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SUPERFAMILY 1.75 2019 1649
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* Some signatures may not have matches to UniProtKB proteins.
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** Not all signatures of a member database may be integrated at the time
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of an InterPro release.
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We use MobiDB-lite, a derivative of the MobiDB database, to provide consensus annotation of long-range intrinsic disorder in protein sequences.
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Read more about MobiDB-lite in Bioinformatics, 33(9), 2017, 1402–1404, (doi: 10.1093/bioinformatics/btx015).
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Sequence Database Version Count Count of proteins matching
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any signature integrated signatures
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UniProtKB 2026_01 203130941 170583479 (84.0%) 166550181 (82.0%)
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UniProtKB/TrEMBL 2026_01 202556314 170024218 (83.9%) 165992422 (81.9%)
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UniProtKB/Swiss-Prot 2026_01 574627 559261 (97.3%) 557759 (97.1%)
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Total number of proteins included in InterPro
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Canonical sequences: 203130941
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Splice variants: 67353
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| 73 |
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Total proteins: 203198294
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| 74 |
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InterPro to GO
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| 76 |
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* Number of GO terms mapped to InterPro - 30200
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| 78 |
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| 79 |
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| 80 |
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Feedback
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| 81 |
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We need your help and would welcome any feedback. If you find errors or
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| 82 |
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omissions please let us know. You can contact us at:
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| 83 |
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https://www.ebi.ac.uk/support/interpro-general-query
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| 84 |
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Copyright
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| 85 |
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InterPro - Integrated Resource Of Protein Domains And Functional Sites.
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| 86 |
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Copyright (C) 2026 The InterPro Consortium. This manual and the
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| 87 |
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accompanying database may be copied and redistributed freely, without
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| 88 |
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advance permission, provided that this Copyright statement is reproduced
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| 89 |
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with each copy.
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current_release/short_names.dat
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current_release/sites.xml.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:288710382c9555e223b4d56e2ebbae232de1e97888d722a89d5f727442e08f4e
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size 18322958347
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