| |
| |
| |
| |
| @@ -1,6 +1,63 @@ |
| module TestCatElements |
| using Test |
| using Catlab.GATs, Catlab.Theories, Catlab.Graphs, Catlab.CategoricalAlgebra |
| +import Catlab.CategoricalAlgebra.CSets: ACSetTransformation |
| +import ACSets |
| +import ACSets: ACSet, acset_schema, add_parts!, codom_parts, dom_parts, |
| + has_part, has_subpart, incident, IntParts, nparts, parts, set_subpart!, |
| + subpart |
| + |
| +struct WrappedGraph <: ACSet{IntParts} |
| + data::Graph |
| +end |
| +WrappedGraph() = WrappedGraph(Graph()) |
| + |
| +acset_schema(::WrappedGraph) = acset_schema(Graph()) |
| +nparts(g::WrappedGraph, p::Symbol) = nparts(g.data, p) |
| +parts(g::WrappedGraph, p::Symbol) = parts(g.data, p) |
| +add_parts!(g::WrappedGraph, p::Symbol, n::Int) = add_parts!(g.data, p, n) |
| +set_subpart!(g::WrappedGraph, part::Int, f::Symbol, val) = |
| + set_subpart!(g.data, part, f, val) |
| +subpart(g::WrappedGraph, f::Symbol) = subpart(g.data, f) |
| +subpart(g::WrappedGraph, part, f::Symbol) = subpart(g.data, part, f) |
| +subpart(g::WrappedGraph, names::Tuple{Vararg{Symbol}}) = subpart(g.data, names) |
| +subpart(g::WrappedGraph, part, names::Tuple{Vararg{Symbol}}) = |
| + subpart(g.data, part, names) |
| +dom_parts(g::WrappedGraph, f::Symbol) = dom_parts(g.data, f) |
| +codom_parts(g::WrappedGraph, f::Symbol) = codom_parts(g.data, f) |
| +has_part(g::WrappedGraph, p::Symbol) = has_part(g.data, p) |
| +has_subpart(g::WrappedGraph, f::Symbol) = has_subpart(g.data, f) |
| +incident(g::WrappedGraph, part, f::Symbol) = incident(g.data, part, f) |
| +incident(g::WrappedGraph, part, names::Tuple{Vararg{Symbol}}) = |
| + incident(g.data, part, names) |
| +ACSetTransformation(components, X::WrappedGraph, Y::WrappedGraph) = |
| + ACSetTransformation(components, X.data, Y.data) |
| + |
| +@testset "Custom ACSet category-of-elements APIs" begin |
| + arr = path_graph(Graph, 2) |
| + wrapped_arr = WrappedGraph(arr) |
| + @test elements(wrapped_arr) == elements(arr) |
| + |
| + wrapped_two_edge = WrappedGraph(path_graph(Graph, 3)) |
| + el_wrapped_two_edge = elements(wrapped_two_edge) |
| + @test nparts(el_wrapped_two_edge, :El) == 5 |
| + @test nparts(el_wrapped_two_edge, :Arr) == 4 |
| + |
| + round_trip_wrapped = inverse_elements(el_wrapped_two_edge, WrappedGraph()) |
| + @test nparts(round_trip_wrapped, :V) == 3 |
| + @test nparts(round_trip_wrapped, :E) == 2 |
| + @test subpart(round_trip_wrapped, :src) == [1, 2] |
| + @test subpart(round_trip_wrapped, :tgt) == [2, 3] |
| + |
| + graph_two_edge = path_graph(Graph, 3) |
| + graph_hom = homomorphism(arr, graph_two_edge; initial=(V=[1, 2], E=[1])) |
| + el_hom = elements(graph_hom) |
| + inv_wrapped_hom = inverse_elements(el_hom, WrappedGraph()) |
| + @test nparts(dom(inv_wrapped_hom), :E) == 1 |
| + @test nparts(codom(inv_wrapped_hom), :E) == 2 |
| + @test collect(force(inv_wrapped_hom)[:V]) == [1, 2] |
| + @test collect(force(inv_wrapped_hom)[:E]) == [1] |
| +end |
| |
| arr = @acset Graph begin |
| V = 2 |
| |
| new file mode 100755 |
| |
| |
| @@ -0,0 +1,60 @@ |
| +#!/bin/bash |
| +set -uo pipefail |
| +cd /testbed |
| + |
| + |
| +set -e |
| +pkg_instantiate() { |
| + if ! julia --project=. -e 'using Pkg; Pkg.instantiate()' > /tmp/fixture_pkg_instantiate.log 2>&1; then |
| + cat /tmp/fixture_pkg_instantiate.log |
| + return 1 |
| + fi |
| +} |
| + |
| +pkg_instantiate |
| +ACSETS_DIR=$(julia --project=. -e 'using ACSets; println(dirname(dirname(pathof(ACSets))))') |
| +sed -i 's/abstract type SimpleACSet{PT} <: ACSet{PT} end/abstract type SimpleACSet{PT<:PartsType} <: ACSet{PT} end/' "$ACSETS_DIR/src/DenseACSets.jl" |
| +sed -i 's/struct DynamicACSet{PT} <: SimpleACSet{PT}/struct DynamicACSet{PT<:PartsType} <: SimpleACSet{PT}/' "$ACSETS_DIR/src/DenseACSets.jl" |
| +rm -rf /root/.julia/compiled/v1.10/ACSets /root/.julia/compiled/v1.10/Catlab |
| + |
| + |
| +instantiate() { |
| + pkg_instantiate |
| +} |
| + |
| +case "${1:-}" in |
| + base) |
| + instantiate |
| + awk ' |
| + /^@testset "Custom ACSet category-of-elements APIs" begin$/ { skip=1; next } |
| + skip && /^end$/ { skip=0; next } |
| + !skip { print } |
| + ' test/categorical_algebra/CatElements.jl > /tmp/cat_elements_base.jl |
| + julia --project=. /tmp/cat_elements_base.jl |
| + ;; |
| + new) |
| + instantiate |
| + printf '%s\n' 'module FixtureDynamicCatElements' > /tmp/cat_elements_dynamic.jl |
| + printf '%s\n' 'using Test' >> /tmp/cat_elements_dynamic.jl |
| + printf '%s\n' 'using Catlab.GATs, Catlab.Theories, Catlab.Graphs, Catlab.CategoricalAlgebra' >> /tmp/cat_elements_dynamic.jl |
| + set +e |
| + awk ' |
| + /^import Catlab.CategoricalAlgebra.CSets: ACSetTransformation$/ { capture=1 } |
| + capture && /^arr = @acset Graph begin$/ { found=1; exit } |
| + capture { print } |
| + END { if (!found) exit 3 } |
| + ' test/categorical_algebra/CatElements.jl >> /tmp/cat_elements_dynamic.jl |
| + awk_status=$? |
| + set -e |
| + printf '%s\n' 'end # module' >> /tmp/cat_elements_dynamic.jl |
| + if [ "$awk_status" -ne 0 ]; then |
| + echo "Custom ACSet testset not found in CatElements test file" |
| + exit "$awk_status" |
| + fi |
| + julia --project=. /tmp/cat_elements_dynamic.jl |
| + ;; |
| + *) |
| + echo "usage: $0 base|new" |
| + exit 2 |
| + ;; |
| +esac |
|
|