Chase Mateusiak commited on
Commit
bc5d4d7
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1 Parent(s): d0588e2

adding the yep filtered peaks as a dataset

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  1. README.md +24 -0
  2. yep_filtered_peaks.parquet +3 -0
README.md CHANGED
@@ -351,6 +351,30 @@ configs:
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  dtype: int32
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  description: "Depth of coverage (number of 5' tags) at this genomic position"
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  - config_name: rossi_2021_af_replicates
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  description: ChIP-exo annotated features at biological replicate level with binding peaks and statistical significance metrics
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  dataset_type: annotated_features
 
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  dtype: int32
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  description: "Depth of coverage (number of 5' tags) at this genomic position"
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+ - config_name: yep_filtered_peaks
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+ description: "yeastepigenome.org peaks with the peaks overlapping blacklisted regions removed (see Rossi paper)"
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+ description: genome_map
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+ data_files:
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+ - split: train
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+ path: yep_filtered_peaks.parquet
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+ dataset_info:
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+ features:
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+ - name: yeastepigenome_id
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+ dtype: string
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+ description: Sample identifier used by yeastepigenome.org
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+ - name: chr
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+ dtype: string
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+ description: Chromosome name (e.g., chrI, chrII, etc.)
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+ - name: start
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+ dtype: int32
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+ description: 0-based start position of the peak region
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+ - name: end
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+ dtype: int32
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+ description: 0-based, half open end position of a single base resolution peak
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+ - name: score
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+ dtype: int32
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+ description: "Score assigned by ChExMix as reported by yeastepigenome.org"
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+
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  - config_name: rossi_2021_af_replicates
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  description: ChIP-exo annotated features at biological replicate level with binding peaks and statistical significance metrics
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  dataset_type: annotated_features
yep_filtered_peaks.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:38ec6d47a44317a391ce3afcfc9c8aa19f1e5997865d63bbb8c4884693853e91
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+ size 3619341