| description: Attribute Standardizer Output Schema in alignment with ENCODE schema |
|
|
| properties: |
| File accession: |
| type: string |
| description: "File ID/Accession" |
| File Type : |
| type: string |
| description: "File Types (eg. bed, bigWig)" |
| File format type: |
| type: string |
| description: "File Convention/Format (eg. narrowPeak)" |
| Output type: |
| type: string |
| description: "The output type provides additional information about the expected contents in the file." |
| File assembly: |
| type: string |
| description: "Type of Genome Assemblies (eg. GRCh38)" |
| Assay: |
| type: string |
| description: "The name of the assay performed" |
| Biosample term name: |
| type: string |
| description: "The human readable ontology name used to describe the biosample." |
| Biosample type: |
| type: string |
| description: "A categorization of biosamples into major groups(eg.induced pluripotent stem cell, stem cell)." |
| Biosample Organism: |
| type: string |
| description: "The species of the biosample." |
| Biosample treatments: |
| type: string |
| description: "The name of the chemical or biological agent applied to a biosample in order to elicit a response." |
| Biosample genetic modifications methods: |
| type: string |
| description: "Experimental Techniques used for genetic modification (eg. CRISPR)" |
| Biosample genetic modifications categories: |
| type: string |
| description: "Type of genetic modification (eg. insertion)" |
| Experiment Target: |
| type: string |
| description: "Experimental Targets (eg. H3K27ac-human)" |
| Library made from: |
| type: string |
| description: "Types of libraries created from biological samples." |
| Experiment date released: |
| type: string |
| description: "Date of the experiment release" |
| Project: |
| type: string |
| description: "The project under which the experiment was performed( eg. ENCODE)" |
| Lab: |
| type: string |
| description: "Lab where the processing took place." |
| File Download URL: |
| type: string |
| description: "File Download URL" |
| required: |
| - None |
