PANDA / scripts /analysis

262 kB

Ctrl+K

1 contributor

History: 2 commits

bryan7264

Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures

141bacd verified 28 days ago

100_primary_eden_discovery.py
11.4 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
101_primary_eden_derm_scoring.py
7.87 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
102_train_on_dingwall_variantA.py
14.7 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
103_replicate_dingwall_seurat_pipeline.py
12.1 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
104_train_on_dingwall_derm_labels.py
12.1 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
105_primary_eden_full_dermal.py
6.42 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
106_melanoblast_neural_crest.py
5.74 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
107_dingwall_class_deg_count.py
5.12 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
108_dahlin_lineage_metabolism.py
6.64 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
109_veres_mature_beta.py
4.11 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
110_veres_polyhormonal_alpha.py
5 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
44_en1_cko_contrast.py
5.46 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
45_marker_refinement.py
3.08 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
49_melanocyte_deep_dive.py
6.21 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
57_multiclass_pathway_analysis.py
6.04 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
57_pathway_analysis.py
27.4 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
62_time_course_analysis.py
5.38 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
63_nestorowa_zero_shot.py
6.64 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
66_dahlin_kit_mutant.py
8.67 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
67_dahlin_within_class.py
6.25 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
70_prototype_geometry.py
4.39 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
72_emergent_axes.py
3.26 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
73_novel_populations_dahlin.py
6.06 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
80_prototype_gene_attribution.py
9.27 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
81_counterfactual_knockouts.py
5.04 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
82_gene_coattribution_modules.py
3.04 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
83_prototype_training_trajectory.py
3.08 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
84_adversary_purification.py
5.8 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
85_hessian_gene_interactions.py
5.68 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
90_dingwall_marker_deep_dive.py
4.71 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
91_veres_marker_deep_dive.py
5.79 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
92_dahlin_marker_deep_dive.py
7.5 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
93_true_zero_shot_baron.py
4.99 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
94_true_zero_shot_nestorowa.py
5.51 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
95_adult_beta_validation.py
4.24 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
98_eden_posthoc_detection.py
7.83 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
99_en1_dual_role_analysis.py
7.81 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago
README.md
1.33 kB
Correction pass: gate-matched Dahlin, retracted unsupported claims, complete HF-placode DEG set, restyled figures 28 days ago