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- **Sample Inference Code:** Described conceptually in the publications ; code corresponds to variable-to-variable generation with beam search can be found at our GitHub repository: https://github.com/MSDLLCpapers/MMPTTransformer.
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## 7. Citation
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- **BibTeX:**
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```bibtex
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@misc{pan2026retrievalaugmentedfoundationmodelsmatched,
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title={Retrieval-Augmented Foundation Models for Matched Molecular Pair Transformations to Recapitulate Medicinal Chemistry Intuition},
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- **Sample Inference Code:** Described conceptually in the publications ; code corresponds to variable-to-variable generation with beam search can be found at our GitHub repository: https://github.com/MSDLLCpapers/MMPTTransformer.
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## 7. Citation
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```bibtex
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@misc{pan2026retrievalaugmentedfoundationmodelsmatched,
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title={Retrieval-Augmented Foundation Models for Matched Molecular Pair Transformations to Recapitulate Medicinal Chemistry Intuition},
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