moPPIt-v2 / scripts /train_ten_species_fudge_classifier.sh
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#!/bin/bash
#SBATCH -o ../watch_folder/%x_%j.out # output file (%j expands to jobID)
#SBATCH -N 1 # Total number of nodes requested
#SBATCH --get-user-env # retrieve the users login environment
#SBATCH --mem=64000 # server memory requested (per node)
#SBATCH -t 960:00:00 # Time limit (hh:mm:ss)
#SBATCH --constraint="[a100|a6000|a5000|3090]"
#SBATCH --ntasks-per-node=4
#SBATCH --gres=gpu:4 # Type/number of GPUs needed
#SBATCH --open-mode=append # Do not overwrite logs
#SBATCH --requeue # Requeue upon preemption
<<comment
# Usage:
cd scripts/
sbatch \
--export=ALL \
--job-name=train_ten_species_fudge_classifier_${PROP} \
train_ten_species_fudge_classifier.sh
comment
# Setup environment
cd ../ || exit # Go to the root directory of the repo
source setup_env.sh
export HYDRA_FULL_ERROR=1
export NCCL_P2P_LEVEL=NVL
LABEL_SMOOTHING=FALSE
# To enable preemption re-loading, set `hydra.run.dir` or
srun python -u -m main \
mode=train_classifier \
+is_fudge_classifier=True \
+use_label_smoothing=${LABEL_SMOOTHING} \
parameterization=ar \
data=ten_species \
loader.global_batch_size=32 \
loader.eval_global_batch_size=64 \
classifier_model=tiny-dimamba-classifier \
classifier_backbone=dimamba \
classifier_model.bidirectional=False \
classifier_model.bidirectional_strategy=null \
classifier_model.bidirectional_weight_tie=null \
classifier_model.pooling=no_pooling \
model.length=32768 \
optim.lr=2e-3 \
lr_scheduler=cosine_decay_warmup \
lr_scheduler.warmup_t=3000 \
lr_scheduler.lr_min=2e-6 \
training.guidance=null \
+training.use_label_smoothing=${LABEL_SMOOTHING} \
callbacks.checkpoint_every_n_steps.every_n_train_steps=6_000 \
callbacks.checkpoint_monitor.monitor=val/cross_entropy \
trainer.val_check_interval=3_000 \
trainer.max_steps=30_000 \
wandb.group=train_classifier \
wandb.name="ten_species-fudge_classifier" \
hydra.run.dir="./outputs/ten_species/fudge_classifier"