File size: 545 Bytes
a887ffc 29899b4 a887ffc 1927f8f 80b6a2c 1927f8f 80b6a2c 1927f8f 80b6a2c 1927f8f | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 | name: post_fimo
task_type: fimo
fimo_out_dir: dpacman/data_files/processed/fimo/fimo_out_q
processed_output_csv: dpacman/data_files/processed/fimo/post_fimo/fimo_hits_only/remap2022_crm_fimo_output_q_processed.csv
json_dir: dpacman/data_files/raw/genomes/hg38
idmap_path: dpacman/data_files/raw/remap/idmapping_reviewed_true_2025_08_15.tsv
remap_path: /vast/projects/pranam/lab/sophie/DPACMAN/dpacman/data_files/processed/fimo/remap2022_crm_fimo_input.csv
jaspar_boost: 333
keep_fimo_only: true
seeds: [0]
max_protein_len: 1998
debug: false |