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| #ifndef BLITZ_INTERFACE_HH |
| #define BLITZ_INTERFACE_HH |
|
|
| #include <blitz/blitz.h> |
| #include <blitz/array.h> |
| #include <blitz/vector-et.h> |
| #include <blitz/vecwhere.h> |
| #include <blitz/matrix.h> |
| #include <vector> |
|
|
| BZ_USING_NAMESPACE(blitz) |
|
|
| template<class real> |
| class blitz_interface{ |
|
|
| public : |
|
|
| typedef real real_type ; |
|
|
| typedef std::vector<real> stl_vector; |
| typedef std::vector<stl_vector > stl_matrix; |
|
|
| typedef blitz::Array<real, 2> gene_matrix; |
| typedef blitz::Array<real, 1> gene_vector; |
| |
| |
|
|
| static inline std::string name() { return "blitz"; } |
|
|
| static void free_matrix(gene_matrix & A, int N){} |
|
|
| static void free_vector(gene_vector & B){} |
|
|
| static inline void matrix_from_stl(gene_matrix & A, stl_matrix & A_stl){ |
| A.resize(A_stl[0].size(),A_stl.size()); |
| for (int j=0; j<A_stl.size() ; j++){ |
| for (int i=0; i<A_stl[j].size() ; i++){ |
| A(i,j)=A_stl[j][i]; |
| } |
| } |
| } |
|
|
| static inline void vector_from_stl(gene_vector & B, stl_vector & B_stl){ |
| B.resize(B_stl.size()); |
| for (int i=0; i<B_stl.size() ; i++){ |
| B(i)=B_stl[i]; |
| } |
| } |
|
|
| static inline void vector_to_stl(gene_vector & B, stl_vector & B_stl){ |
| for (int i=0; i<B_stl.size() ; i++){ |
| B_stl[i]=B(i); |
| } |
| } |
|
|
| static inline void matrix_to_stl(gene_matrix & A, stl_matrix & A_stl){ |
| int N=A_stl.size(); |
| for (int j=0;j<N;j++){ |
| A_stl[j].resize(N); |
| for (int i=0;i<N;i++) |
| A_stl[j][i] = A(i,j); |
| } |
| } |
|
|
| static inline void matrix_matrix_product(const gene_matrix & A, const gene_matrix & B, gene_matrix & X, int N) |
| { |
| firstIndex i; |
| secondIndex j; |
| thirdIndex k; |
| X = sum(A(i,k) * B(k,j), k); |
| } |
|
|
| static inline void ata_product(const gene_matrix & A, gene_matrix & X, int N) |
| { |
| firstIndex i; |
| secondIndex j; |
| thirdIndex k; |
| X = sum(A(k,i) * A(k,j), k); |
| } |
|
|
| static inline void aat_product(const gene_matrix & A, gene_matrix & X, int N) |
| { |
| firstIndex i; |
| secondIndex j; |
| thirdIndex k; |
| X = sum(A(i,k) * A(j,k), k); |
| } |
|
|
| static inline void matrix_vector_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) |
| { |
| firstIndex i; |
| secondIndex j; |
| X = sum(A(i,j)*B(j),j); |
| } |
|
|
| static inline void atv_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) |
| { |
| firstIndex i; |
| secondIndex j; |
| X = sum(A(j,i) * B(j),j); |
| } |
|
|
| static inline void axpy(const real coef, const gene_vector & X, gene_vector & Y, int N) |
| { |
| firstIndex i; |
| Y = Y(i) + coef * X(i); |
| |
| } |
|
|
| static inline void copy_matrix(const gene_matrix & source, gene_matrix & cible, int N){ |
| cible = source; |
| |
| |
| |
| |
| |
| |
| } |
|
|
| static inline void copy_vector(const gene_vector & source, gene_vector & cible, int N){ |
| |
| cible = source; |
| } |
|
|
| }; |
|
|
| #endif |
|
|